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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015918449.1_cds_XP_016467884.1_60586
CDS Infomation

[gene=LOC107790476] [db_xref=GeneID:107790476] [protein=E3 ubiquitin-protein ligase RGLG2-like] [protein_id=XP_016467884.1] [location=complement(join(104784..104864,104948..105004,105256..105436,105603..105730,105836..105941,106024..106103,107247..107344,107448..107561,107638..107778,107885..107969,108907..109134))] [gbkey=CDS]
Sequence

ATGGGTGGCAAGAGTTCAAAGAGATCAACAACTGGTCGATATGCATCATTTGGGTCCAGT
TCATATTCAGGTTATCAAGGCTATCCACAGTCACCATATACTCAACCAAGCTACAATTAT
CCCCCGCCACCTCCTTGTCAAACATATGGTGGTCCACCTCCTGAGTCAAGGAAAAGGCTT
GAGAGGAAATATTCAAAGATAGATGATGACTACCACAGCTTAGAGCAGGTTACTGATGCC
CTTGCACGTGCTGGGCTAGAGTCTTCGAACTTAATTGTTGGCATCGATTTTACCAAGAGC
AATGAGTGGACTGGTGCAAGGTCATTCCACCGGAAAAGTTTGCATCACATTGGTGATCAG
CAAAATCCATATGAACAAGCAATATCCATCATTGGAAGAACATTATCAAAATTTGATGAG
GACAACCTGATTCCTTGTTTTGGATTTGGAGATGCCTCAACACATGACCAAGAAGTCTTT
GCTTTCTATCCGGATGACAAATATTGTAATGGATTCGAGGAAGTACTGAGTAGATATAGA
GAATTGGTTCCTCAATTACGGCTTGCAGGACCAACATCATTTGCTCCTATTATTGAAATG
GCAATCACTATTGTTGAGCAGAGTGGCGGCCAGTACCACGTTTTATTGATAATAGCGGAT
GGACAGGTTACAAGAAGTGTAGATACTGTGCGTGGTCAATTAAGCCCTCAAGAGAAGAGA
ACAGTTGAAGCAATTGTGAAAGCAAGTGAATATCCCTTGTCTATTATTTTAGTTGGGGTT
GGAGATGGGCCATGGGACATGATGAGGGAATTTGATGACAATATCCCTGCTCGAGCCTTT
GACAATTTCCAGTTTGTTAATTTCACAGATATCATGTCAAAAACTGTGGACCGGTCTCGG
AAAGAAGCTGAGTTTGCCTTAGCAGCATTGATGGAAATACCTTCTCAGTACAAAGCAACT
CTGGAGCTGAACATTCTGGGTGCTCGTAGAGGGAATGAAATTGACAGGATTCCTCTCCCC
CCTCCTCGCTATGGTGCAGCTTCTTTTGGCACATCAAAACCTTCACAAAGCAATAGTTAC
CGTCCAAGTGCGCCTTCTAGCACTAGCAGACACAATTCGGCTGTTGGATCAAGTCATCCT
GCAAGTTCTGCAGATAATCATCTCTGTCCCATCTGCATAACCAATCCAAAGGACATGGCA
TTTGGTTGTGGACACCAGACATGTTGTGAATGTGGGCAAGATCTTCAGTTGTGCCCCATC
TGTCGGGACAGCATTCAGACTAGGATAAGACTTTACTGA

Peptide Sequence

PEP ID

XP_016467884.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Nicotiana tabacum]
Sequence

MGGKSSKRSTTGRYASFGSSSYSGYQGYPQSPYTQPSYNYPPPPPCQTYGGPPPESRKRL
ERKYSKIDDDYHSLEQVTDALARAGLESSNLIVGIDFTKSNEWTGARSFHRKSLHHIGDQ
QNPYEQAISIIGRTLSKFDEDNLIPCFGFGDASTHDQEVFAFYPDDKYCNGFEEVLSRYR
ELVPQLRLAGPTSFAPIIEMAITIVEQSGGQYHVLLIIADGQVTRSVDTVRGQLSPQEKR
TVEAIVKASEYPLSIILVGVGDGPWDMMREFDDNIPARAFDNFQFVNFTDIMSKTVDRSR
KEAEFALAALMEIPSQYKATLELNILGARRGNEIDRIPLPPPRYGAASFGTSKPSQSNSY
RPSAPSSTSRHNSAVGSSHPASSADNHLCPICITNPKDMAFGCGHQTCCECGQDLQLCPI
CRDSIQTRIRLY

Transcript Sequence

Gene sequence data has not been registered.